Based on an exponentially increasing number of academic articles, discovering and citing comprehensive and appropriate resources has become a non-trivial task. Conventional citation recommender methods suffer from severe information loss. For example, they do not consider the section of the paper that the user is writing and for which they need to find a citation, the relatedness between the words in the local context (the text span that describes a citation), or the importance on each word from the local context. These shortcomings make such methods insufficient for recommending adequate citations to academic manuscripts. In this study, we propose a novel embedding-based neural network called “dual attention model for citation recommendation (DACR)” to recommend citations during manuscript preparation. Our method adapts embedding of three semantic information: words in the local context, structural contexts, and the section on which a user is working. A neural network model is designed to maximize the similarity between the embedding of the three input (local context words, section and structural contexts) and the target citation appearing in the context. The core of the neural network model is composed of self-attention and additive attention, where the former aims to capture the relatedness between the contextual words and structural context, and the latter aims to learn the importance of them. The experiments on real-world datasets demonstrate the effectiveness of the proposed approach.