Good figure captions help paper readers understand complex scientific figures. Unfortunately, even published papers often have poorly written captions. Automatic caption generation could aid paper writers by providing good starting captions that can be refined for better quality. Prior work often treated figure caption generation as a vision-to-language task. In this paper, we show that it can be more effectively tackled as a text summarization task in scientific documents. We fine-tuned PEGASUS, a pre-trained abstractive summarization model, to specifically summarize figure-referencing paragraphs (e.g., “Figure 3 shows...”) into figure captions. Experiments on large-scale arXiv figures show that our method outperforms prior vision methods in both automatic and human evaluations. We further conducted an in-depth investigation focused on two key challenges: (i) the common presence of low-quality author-written captions and (ii) the lack of clear standards for good captions. Our code and data are available at: https://github.com/Crowd-AI-Lab/Generating-Figure-Captions-as-a-Text-Summarization-Task.

Organisations disclose their privacy practices by posting privacy policies on their websites. Even though internet users often care about their digital privacy, they usually do not read privacy policies, since understanding them requires a significant investment of time and effort. Natural language processing has been used to create experimental tools to interpret privacy policies, but there has been a lack of large privacy policy corpora to facilitate the creation of large-scale semi-supervised and unsupervised models to interpret and simplify privacy policies. Thus, we present the PrivaSeer Corpus of 1,005,380 English language website privacy policies collected from the web. The number of unique websites represented in PrivaSeer is about ten times larger than the next largest public collection of web privacy policies, and it surpasses the aggregate of unique websites represented in all other publicly available privacy policy corpora combined. We describe a corpus creation pipeline with stages that include a web crawler, language detection, document classification, duplicate and near-duplicate removal, and content extraction. We employ an unsupervised topic modelling approach to investigate the contents of policy documents in the corpus and discuss the distribution of topics in privacy policies at web scale. We further investigate the relationship between privacy policy domain PageRanks and text features of the privacy policies. Finally, we use the corpus to pretrain PrivBERT, a transformer-based privacy policy language model, and obtain state of the art results on the data practice classification and question answering tasks.

Presentation slides generated from original research papers provide an efficient form to present research innovations. Manually generating presentation slides is labor-intensive. We propose a method to automatically generates slides for scientific articles based on a corpus of 5000 paper-slide pairs compiled from conference proceedings websites. The sentence labeling module of our method is based on SummaRuNNer, a neural sequence model for extractive summarization. Instead of ranking sentences based on semantic similarities in the whole document, our algorithm measures the importance and novelty of sentences by combining semantic and lexical features within a sentence window. Our method outperforms several baseline methods including SummaRuNNer by a significant margin in terms of ROUGE score.

Researchers use figures to communicate rich, complex information in scientific papers. The captions of these figures are critical to conveying effective messages. However, low-quality figure captions commonly occur in scientific articles and may decrease understanding. In this paper, we propose an end-to-end neural framework to automatically generate informative, high-quality captions for scientific figures. To this end, we introduce SCICAP, a large-scale figure-caption dataset based on computer science arXiv papers published between 2010 and 2020. After pre-processing – including figure-type classification, sub-figure identification, text normalization, and caption text selection – SCICAP contained more than two million figures extracted from over 290,000 papers. We then established baseline models that caption graph plots, the dominant (19.2%) figure type. The experimental results showed both opportunities and steep challenges of generating captions for scientific figures.

Acknowledgements are ubiquitous in scholarly papers. Existing acknowledgement entity recognition methods assume all named entities are acknowledged. Here, we examine the nuances between acknowledged and named entities by analyzing sentence structure. We develop an acknowledgement extraction system, AckExtract based on open-source text mining software and evaluate our method using manually labeled data. AckExtract uses the PDF of a scholarly paper as input and outputs acknowledgement entities. Results show an overall performance of F_1=0.92. We built a supplementary database by linking CORD-19 papers with acknowledgement entities extracted by AckExtract including persons and organizations and find that only up to 50–60% of named entities are actually acknowledged. We further analyze chronological trends of acknowledgement entities in CORD-19 papers. All codes and labeled data are publicly available at https://github.com/lamps-lab/ackextract.

Author name disambiguation (AND) algorithms identify a unique author entity record from all similar or same publication records in scholarly or similar databases. Typically, a clustering method is used that requires calculation of similarities between each possible record pair. However, the total number of pairs grows quadratically with the size of the author database making such clustering difficult for millions of records. One remedy is a blocking function that reduces the number of pairwise similarity calculations. Here, we introduce a new way of learning blocking schemes by using a conjunctive normal form (CNF) in contrast to the disjunctive normal form (DNF). We demonstrate on PubMed author records that CNF blocking reduces more pairs while preserving high pairs completeness compared to the previous methods that use a DNF and that the computation time is significantly reduced. In addition, we also show how to ensure that the method produces disjoint blocks so that much of the AND algorithm can be efficiently paralleled. Our CNF blocking method is tested on the entire PubMed database of 80 million author mentions and efficiently removes 82.17% of all author record pairs in 10 minutes.

This paper introduces CODA-19, a human-annotated dataset that codes the Background, Purpose, Method, Finding/Contribution, and Other sections of 10,966 English abstracts in the COVID-19 Open Research Dataset. CODA-19 was created by 248 crowd workers from Amazon Mechanical Turk within 10 days, and achieved labeling quality comparable to that of experts. Each abstract was annotated by nine different workers, and the final labels were acquired by majority vote. The inter-annotator agreement (Cohen’s kappa) between the crowd and the biomedical expert (0.741) is comparable to inter-expert agreement (0.788). CODA-19’s labels have an accuracy of 82.2% when compared to the biomedical expert’s labels, while the accuracy between experts was 85.0%. Reliable human annotations help scientists access and integrate the rapidly accelerating coronavirus literature, and also serve as the battery of AI/NLP research, but obtaining expert annotations can be slow. We demonstrated that a non-expert crowd can be rapidly employed at scale to join the fight against COVID-19.

We investigate how machine learning models, specifically ranking models, can be used to select useful distractors for multiple choice questions. Our proposed models can learn to select distractors that resemble those in actual exam questions, which is different from most existing unsupervised ontology-based and similarity-based methods. We empirically study feature-based and neural net (NN) based ranking models with experiments on the recently released SciQ dataset and our MCQL dataset. Experimental results show that feature-based ensemble learning methods (random forest and LambdaMART) outperform both the NN-based method and unsupervised baselines. These two datasets can also be used as benchmarks for distractor generation.

We describe ParsCit, a freely available, open-source implementation of a reference string parsing package. At the core of ParsCit is a trained conditional random field (CRF) model used to label the token sequences in the reference string. A heuristic model wraps this core with added functionality to identify reference strings from a plain text file, and to retrieve the citation contexts. The package comes with utilities to run it as a web service or as a standalone utility. We compare ParsCit on three distinct reference string datasets and show that it compares well with other previously published work.