Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing

Dina Demner-Fushman, Sophia Ananiadou, Kevin Bretonnel Cohen, John Pestian, Jun’ichi Tsujii, Bonnie Webber (Editors)

Anthology ID:: W08-06
Month:: June
Year:: 2008
Address:: Columbus, Ohio
Venue:: BioNLP
Events:: Biomedical Natural Language Processing Workshop (2008) | Other Workshops and Events (2008)
SIG:
Publisher:: Association for Computational Linguistics
URL:: https://preview.aclanthology.org/switch-docopt-to-docopt-ng/W08-06/
DOI:
Bib Export formats:: BibTeX
PDF:: https://preview.aclanthology.org/switch-docopt-to-docopt-ng/W08-06.pdf

pdf bib

pdf bib

Extracting Clinical Relationships from Patient Narratives
Angus Roberts | Robert Gaizauskas | Mark Hepple

pdf bib

Using Automated Feature Optimisation to Create an Adaptable Relation Extraction System
Barry Haddow

pdf bib

Mining the Biomedical Literature for Genic Information
Catalina O. Tudor | K. Vijay-Shanker | Carl J. Schmidt

pdf bib

Accelerating the Annotation of Sparse Named Entities by Dynamic Sentence Selection
Yoshimasa Tsuruoka | Jun’ichi Tsujii | Sophia Ananiadou

pdf bib

The BioScope corpus: annotation for negation, uncertainty and their scope in biomedical texts
György Szarvas | Veronika Vincze | Richárd Farkas | János Csirik

pdf bib

Recognizing Speculative Language in Biomedical Research Articles: A Linguistically Motivated Perspective
Halil Kilicoglu | Sabine Bergler

pdf bib

Cascaded Classifiers for Confidence-Based Chemical Named Entity Recognition
Peter Corbett | Ann Copestake

pdf bib

How to Make the Most of NE Dictionaries in Statistical NER
Yutaka Sasaki | Yoshimasa Tsuruoka | John McNaught | Sophia Ananiadou

pdf bib

Species Disambiguation for Biomedical Term Identification
Xinglong Wang | Michael Matthews

pdf bib

Knowledge Sources for Word Sense Disambiguation of Biomedical Text
Mark Stevenson | Yinkun Guo | Robert Gaizauskas | David Martinez

pdf bib

Automatic inference of indexing rules for MEDLINE
Aurélie Névéol | Sonya Shooshan | Vincent Claveau

pdf bib

pdf bib

pdf bib

Conditional Random Fields and Support Vector Machines for Disorder Named Entity Recognition in Clinical Texts
Dingcheng Li | Guergana Savova | Karin Kipper-Schuler

pdf bib

pdf bib

Extracting Protein-Protein Interaction based on Discriminative Training of the Hidden Vector State Model
Deyu Zhou | Yulan He

pdf bib

A preliminary approach to extract drugs by combining UMLS resources and USAN naming conventions
Isabel Segura-Bedmar | Paloma Martínez | Doaa Samy

pdf bib

Mapping Clinical Notes to Medical Terminologies at Point of Care
Yefeng Wang | Jon Patrick

pdf bib

An Approach to Reducing Annotation Costs for BioNLP
Michael Bloodgood | K. Vijay-Shanker

pdf bib

Temporal Annotation of Clinical Text
Danielle Mowery | Henk Harkema | Wendy Chapman

pdf bib

CBR-Tagger: a case-based reasoning approach to the gene/protein mention problem
Mariana Neves | Monica Chagoyen | José María Carazo | Alberto Pascual-Montano

pdf bib

Textual Information for Predicting Functional Properties of the Genes
Oana Frunza | Diana Inkpen

pdf bib

Determining causal and non-causal relationships in biomedical text by classifying verbs using a Naive Bayesian Classifier
Pieter van der Horn | Bart Bakker | Gijs Geleijnse | Jan Korst | Sergei Kurkin

pdf bib

Statistical Term Profiling for Query Pattern Mining
Paul Buitelaar | Pinar Oezden Wennerberg | Sonja Zillner

pdf bib

Using Language Models to Identify Language Impairment in Spanish-English Bilingual Children
Thamar Solorio | Yang Liu

pdf bib

Raising the Compatibility of Heterogeneous Annotations: A Case Study on
Yue Wang | Kazuhiro Yoshida | Jin-Dong Kim | Rune Saetre | Jun’ichi Tsujii

pdf bib

Adaptive Information Extraction for Complex Biomedical Tasks
Donghui Feng | Gully Burns | Eduard Hovy