Bingyang Ye


2023

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The Coreference under Transformation Labeling Dataset: Entity Tracking in Procedural Texts Using Event Models
Kyeongmin Rim | Jingxuan Tu | Bingyang Ye | Marc Verhagen | Eben Holderness | James Pustejovsky
Findings of the Association for Computational Linguistics: ACL 2023

We demonstrate that coreference resolution in procedural texts is significantly improved when performing transformation-based entity linking prior to coreference relation identification. When events in the text introduce changes to the state of participating entities, it is often impossible to accurately link entities in anaphoric and coreference relations without an understanding of the transformations those entities undergo. We show how adding event semantics helps to better model entity coreference. We argue that all transformation predicates, not just creation verbs, introduce a new entity into the discourse, as a kind of generalized Result Role, which is typically not textually mentioned. This allows us to model procedural texts as process graphs and to compute the coreference type for any two entities in the recipe. We present our annotation methodology and the corpus generated as well as describe experiments on coreference resolution of entity mentions under a process-oriented model of events.

2020

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An Ensemble Approach for Automatic Structuring of Radiology Reports
Morteza Pourreza Shahri | Amir Tahmasebi | Bingyang Ye | Henghui Zhu | Javed Aslam | Timothy Ferris
Proceedings of the 3rd Clinical Natural Language Processing Workshop

Automatic structuring of electronic medical records is of high demand for clinical workflow solutions to facilitate extraction, storage, and querying of patient care information. However, developing a scalable solution is extremely challenging, specifically for radiology reports, as most healthcare institutes use either no template or department/institute specific templates. Moreover, radiologists’ reporting style varies from one to another as sentences are written in a telegraphic format and do not follow general English grammar rules. In this work, we present an ensemble method that consolidates the predictions of three models, capturing various attributes of textual information for automatic labeling of sentences with section labels. These three models are: 1) Focus Sentence model, capturing context of the target sentence; 2) Surrounding Context model, capturing the neighboring context of the target sentence; and finally, 3) Formatting/Layout model, aimed at learning report formatting cues. We utilize Bi-directional LSTMs, followed by sentence encoders, to acquire the context. Furthermore, we define several features that incorporate the structure of reports. We compare our proposed approach against multiple baselines and state-of-the-art approaches on a proprietary dataset as well as 100 manually annotated radiology notes from the MIMIC-III dataset, which we are making publicly available. Our proposed approach significantly outperforms other approaches by achieving 97.1% accuracy.