ChatGPT is a large language model developed by OpenAI. Despite its impressive performance across various tasks, no prior work has investigated its capability in the biomedical domain yet. To this end, this paper aims to evaluate the performance of ChatGPT on various benchmark biomedical tasks, such as relation extraction, document classification, question answering, and summarization. To the best of our knowledge, this is the first work that conducts an extensive evaluation of ChatGPT in the biomedical domain. Interestingly, we find based on our evaluation that in biomedical datasets that have smaller training sets, zero-shot ChatGPT even outperforms the state-of-the-art fine-tuned generative transformer models, such as BioGPT and BioBART. This suggests that ChatGPT’s pre-training on large text corpora makes it quite specialized even in the biomedical domain. Our findings demonstrate that ChatGPT has the potential to be a valuable tool for various tasks in the biomedical domain that lack large annotated data.

The development of large language models (LLMs) such as ChatGPT has brought a lot of attention recently. However, their evaluation in the benchmark academic datasets remains under-explored due to the difficulty of evaluating the generative outputs produced by this model against the ground truth. In this paper, we aim to present a thorough evaluation of ChatGPT’s performance on diverse academic datasets, covering tasks like question-answering, text summarization, code generation, commonsense reasoning, mathematical problem-solving, machine translation, bias detection, and ethical considerations. Specifically, we evaluate ChatGPT across 140 tasks and analyze 255K responses it generates in these datasets. This makes our work the largest evaluation of ChatGPT in NLP benchmarks. In short, our study aims to validate the strengths and weaknesses of ChatGPT in various tasks and provide insights for future research using LLMs. We also report a new emergent ability to follow multi-query instructions that we mostly found in ChatGPT and other instruction-tuned models. Our extensive evaluation shows that even though ChatGPT is capable of performing a wide variety of tasks, and may obtain impressive performance in several benchmark datasets, it is still far from achieving the ability to reliably solve many challenging tasks. By providing a thorough assessment of ChatGPT’s performance across diverse NLP tasks, this paper sets the stage for a targeted deployment of ChatGPT-like LLMs in real-world applications.

Relation prediction on knowledge graphs (KGs) attempts to infer the missing links between entities. Most previous studies are limited to the transductive setting where all entities must be seen during the training, making them unable to perform reasoning on emerging entities. Recently, the inductive setting is proposed to handle the entities in the test phase to be unseen during training, However, it suffers from the inefficient reasoning under the enclosing subgraph extraction issue and the lack of effective entity-independent feature modeling. To this end, we propose a novel Query Adaptive Anchor Representation (QAAR) model for inductive relation prediction. First, we extract one opening subgraph and perform reasoning by one time for all candidate triples, which is more efficient when the number of candidate triples is large. Second, we define some query adaptive anchors which are independent on any specific entity. Based on these anchors, we take advantage of the transferable entity-independent features (relation-aware, structure-aware and distance features) that can be used to produce entity embeddings for emerging unseen entities. Such entity-independent features is modeled by a query-aware graph attention network on the opening subgraph. Experimental results demonstrate that our proposed QAAR outperforms state-of-the-art baselines in inductive relation prediction task.