AUEB at BioASQ 6: Document and Snippet Retrieval

George Brokos, Polyvios Liosis, Ryan McDonald, Dimitris Pappas, Ion Androutsopoulos


Abstract
We present AUEB’s submissions to the BioASQ 6 document and snippet retrieval tasks (parts of Task 6b, Phase A). Our models use novel extensions to deep learning architectures that operate solely over the text of the query and candidate document/snippets. Our systems scored at the top or near the top for all batches of the challenge, highlighting the effectiveness of deep learning for these tasks.
Anthology ID:
W18-5304
Volume:
Proceedings of the 6th BioASQ Workshop A challenge on large-scale biomedical semantic indexing and question answering
Month:
November
Year:
2018
Address:
Brussels, Belgium
Editors:
Ioannis A. Kakadiaris, George Paliouras, Anastasia Krithara
Venue:
BioASQ
SIG:
Publisher:
Association for Computational Linguistics
Note:
Pages:
30–39
Language:
URL:
https://aclanthology.org/W18-5304
DOI:
10.18653/v1/W18-5304
Bibkey:
Cite (ACL):
George Brokos, Polyvios Liosis, Ryan McDonald, Dimitris Pappas, and Ion Androutsopoulos. 2018. AUEB at BioASQ 6: Document and Snippet Retrieval. In Proceedings of the 6th BioASQ Workshop A challenge on large-scale biomedical semantic indexing and question answering, pages 30–39, Brussels, Belgium. Association for Computational Linguistics.
Cite (Informal):
AUEB at BioASQ 6: Document and Snippet Retrieval (Brokos et al., BioASQ 2018)
Copy Citation:
PDF:
https://preview.aclanthology.org/nschneid-patch-4/W18-5304.pdf
Code
 nlpaueb/aueb-bioasq6
Data
BioASQ