UU_TAILS at MEDIQA 2019: Learning Textual Entailment in the Medical Domain

Noha Tawfik, Marco Spruit


Abstract
This article describes the participation of the UU_TAILS team in the 2019 MEDIQA challenge intended to improve domain-specific models in medical and clinical NLP. The challenge consists of 3 tasks: medical language inference (NLI), recognizing textual entailment (RQE) and question answering (QA). Our team participated in tasks 1 and 2 and our best runs achieved a performance accuracy of 0.852 and 0.584 respectively for the test sets. The models proposed for task 1 relied on BERT embeddings and different ensemble techniques. For the RQE task, we trained a traditional multilayer perceptron network based on embeddings generated by the universal sentence encoder.
Anthology ID:
W19-5053
Volume:
Proceedings of the 18th BioNLP Workshop and Shared Task
Month:
August
Year:
2019
Address:
Florence, Italy
Editors:
Dina Demner-Fushman, Kevin Bretonnel Cohen, Sophia Ananiadou, Junichi Tsujii
Venue:
BioNLP
SIG:
SIGBIOMED
Publisher:
Association for Computational Linguistics
Note:
Pages:
493–499
Language:
URL:
https://aclanthology.org/W19-5053
DOI:
10.18653/v1/W19-5053
Bibkey:
Cite (ACL):
Noha Tawfik and Marco Spruit. 2019. UU_TAILS at MEDIQA 2019: Learning Textual Entailment in the Medical Domain. In Proceedings of the 18th BioNLP Workshop and Shared Task, pages 493–499, Florence, Italy. Association for Computational Linguistics.
Cite (Informal):
UU_TAILS at MEDIQA 2019: Learning Textual Entailment in the Medical Domain (Tawfik & Spruit, BioNLP 2019)
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PDF:
https://preview.aclanthology.org/nschneid-patch-2/W19-5053.pdf