pdf bib
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire Nédellec | Robert Bossy | Jin-Dong Kim | Jung-jae Kim | Tomoko Ohta | Sampo Pyysalo | Pierre Zweigenbaum

pdf bib
Overview of BioNLP Shared Task 2013
Claire Nédellec | Robert Bossy | Jin-Dong Kim | Jung-jae Kim | Tomoko Ohta | Sampo Pyysalo | Pierre Zweigenbaum

pdf bib
The Genia Event Extraction Shared Task, 2013 Edition - Overview
Jin-Dong Kim | Yue Wang | Yamamoto Yasunori

pdf
TEES 2.1: Automated Annotation Scheme Learning in the BioNLP 2013 Shared Task
Jari Björne | Tapio Salakoski

pdf
EVEX in ST’13: Application of a large-scale text mining resource to event extraction and network construction
Kai Hakala | Sofie Van Landeghem | Tapio Salakoski | Yves Van de Peer | Filip Ginter

pdf
Extracting Biomedical Events and Modifications Using Subgraph Matching with Noisy Training Data
Andrew MacKinlay | David Martinez | Antonio Jimeno Yepes | Haibin Liu | W. John Wilbur | Karin Verspoor

pdf
Biomedical Event Extraction by Multi-class Classification of Pairs of Text Entities
Xiao Liu | Antoine Bordes | Yves Grandvalet

pdf
GRO Task: Populating the Gene Regulation Ontology with events and relations
Jung-jae Kim | Xu Han | Vivian Lee | Dietrich Rebholz-Schuhmann

pdf
Overview of the Cancer Genetics (CG) task of BioNLP Shared Task 2013
Sampo Pyysalo | Tomoko Ohta | Sophia Ananiadou

pdf
Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013
Tomoko Ohta | Sampo Pyysalo | Rafal Rak | Andrew Rowley | Hong-Woo Chun | Sung-Jae Jung | Sung-Pil Choi | Sophia Ananiadou | Jun’ichi Tsujii

pdf
Generalizing an Approximate Subgraph Matching-based System to Extract Events in Molecular Biology and Cancer Genetics
Haibin Liu | Karin Verspoor | Donald C. Comeau | Andrew MacKinlay | W. John Wilbur

pdf
Performance and limitations of the linguistically motivated Cocoa/Peaberry system in a broad biological domain.
SV Ramanan | P. Senthil Nathan

pdf
NaCTeM EventMine for BioNLP 2013 CG and PC tasks
Makoto Miwa | Sophia Ananiadou

pdf
BioNLP Shared Task 2013: Supporting Resources
Pontus Stenetorp | Wiktoria Golik | Thierry Hamon | Donald C. Comeau | Rezarta Islamaj Doğan | Haibin Liu | W. John Wilbur

pdf
A fast rule-based approach for biomedical event extraction
Quoc-Chinh Bui | David Campos | Erik van Mulligen | Jan Kors

pdf
Improving Feature-Based Biomedical Event Extraction System by Integrating Argument Information
Lishuang Li | Yiwen Wang | Degen Huang

pdf
UZH in BioNLP 2013
Gerold Schneider | Simon Clematide | Tilia Ellendorff | Don Tuggener | Fabio Rinaldi | Gintarė Grigonytė

pdf
A Hybrid approach for biomedical event extraction
Xuan Quang Pham | Minh Quang Le | Bao Quoc Ho

pdf
Identification of Genia Events using Multiple Classifiers
Roland Roller | Mark Stevenson

pdf
Exploring a Probabilistic Earley Parser for Event Composition in Biomedical Texts
Mai-Vu Tran | Nigel Collier | Hoang-Quynh Le | Van-Thuy Phi | Thanh-Binh Pham

pdf
Detecting Relations in the Gene Regulation Network
Thomas Provoost | Marie-Francine Moens

pdf
Ontology-based semantic annotation: an automatic hybrid rule-based method
Sondes Bannour | Laurent Audibert | Henry Soldano

pdf
Building A Contrasting Taxa Extractor for Relation Identification from Assertions: BIOlogical Taxonomy & Ontology Phrase Extraction System
Cyril Grouin

pdf
BioNLP Shared Task 2013 – An overview of the Genic Regulation Network Task
Robert Bossy | Philippe Bessières | Claire Nédellec

pdf
BioNLP shared Task 2013 – An Overview of the Bacteria Biotope Task
Robert Bossy | Wiktoria Golik | Zorana Ratkovic | Philippe Bessières | Claire Nédellec

pdf
Bacteria Biotope Detection, Ontology-based Normalization, and Relation Extraction using Syntactic Rules
İlknur Karadeniz | Arzucan Özgür

pdf
Extracting Gene Regulation Networks Using Linear-Chain Conditional Random Fields and Rules
Slavko Žitnik | Marinka Žitnik | Blaž Zupan | Marko Bajec

pdf
IRISA participation to BioNLP-ST13: lazy-learning and information retrieval for information extraction tasks
Vincent Claveau