The advent of scalable deep models and large datasets has improved the performance of Neural Machine Translation (NMT). Knowledge Distillation (KD) enhances efficiency by transferring knowledge from a teacher model to a more compact student model. However, KD approaches to Transformer architecture often rely on heuristics, particularly when deciding which teacher layers to distill from. In this paper, we introduce the “Align-to-Distill” (A2D) strategy, designed to address the feature mapping problem by adaptively aligning student attention heads with their teacher counterparts during training. The Attention Alignment Module (AAM) in A2D performs a dense head-by-head comparison between student and teacher attention heads across layers, turning the combinatorial mapping heuristics into a learning problem. Our experiments show the efficacy of A2D, demonstrating gains of up to +3.61 and +0.63 BLEU points for WMT-2022 De→Dsb and WMT-2014 En→De, respectively, compared to Transformer baselines.The code and data are available at https://github.com/ncsoft/Align-to-Distill.