In this work, we propose ProtoLens, a novel prototype-based model that provides fine-grained, sub-sentence level interpretability for text classification. ProtoLens uses a Prototype-aware Span Extraction module to identify relevant text spans associated with learned prototypes and a Prototype Alignment mechanism to ensure prototypes are semantically meaningful throughout training. By aligning the prototype embeddings with human-understandable examples, ProtoLens provides interpretable predictions while maintaining competitive accuracy. Extensive experiments demonstrate that ProtoLens outperforms both prototype-based and non-interpretable baselines on multiple text classification benchmarks. Code and data are available at https://github.com/weibowen555/ProtoLens.