Tyler Baldwin


2022

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Improving Neural Models for Radiology Report Retrieval with Lexicon-based Automated Annotation
Luyao Shi | Tanveer Syeda-mahmood | Tyler Baldwin
Proceedings of the 2022 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies

Many clinical informatics tasks that are based on electronic health records (EHR) need relevant patient cohorts to be selected based on findings, symptoms and diseases. Frequently, these conditions are described in radiology reports which can be retrieved using information retrieval (IR) methods. The latest of these techniques utilize neural IR models such as BERT trained on clinical text. However, these methods still lack semantic understanding of the underlying clinical conditions as well as ruled out findings, resulting in poor precision during retrieval. In this paper we combine clinical finding detection with supervised query match learning. Specifically, we use lexicon-driven concept detection to detect relevant findings in sentences. These findings are used as queries to train a Sentence-BERT (SBERT) model using triplet loss on matched and unmatched query-sentence pairs. We show that the proposed supervised training task remarkably improves the retrieval performance of SBERT. The trained model generalizes well to unseen queries and reports from different collections.

2021

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BLAR: Biomedical Local Acronym Resolver
William Hogan | Yoshiki Vazquez Baeza | Yannis Katsis | Tyler Baldwin | Ho-Cheol Kim | Chun-Nan Hsu
Proceedings of the 20th Workshop on Biomedical Language Processing

NLP has emerged as an essential tool to extract knowledge from the exponentially increasing volumes of biomedical texts. Many NLP tasks, such as named entity recognition and named entity normalization, are especially challenging in the biomedical domain partly because of the prolific use of acronyms. Long names for diseases, bacteria, and chemicals are often replaced by acronyms. We propose Biomedical Local Acronym Resolver (BLAR), a high-performing acronym resolver that leverages state-of-the-art (SOTA) pre-trained language models to accurately resolve local acronyms in biomedical texts. We test BLAR on the Ab3P corpus and achieve state-of-the-art results compared to the current best-performing local acronym resolution algorithms and models.

2015

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An In-depth Analysis of the Effect of Text Normalization in Social Media
Tyler Baldwin | Yunyao Li
Proceedings of the 2015 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies

2013

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Adaptive Parser-Centric Text Normalization
Congle Zhang | Tyler Baldwin | Howard Ho | Benny Kimelfeld | Yunyao Li
Proceedings of the 51st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)

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Automatic Term Ambiguity Detection
Tyler Baldwin | Yunyao Li | Bogdan Alexe | Ioana R. Stanoi
Proceedings of the 51st Annual Meeting of the Association for Computational Linguistics (Volume 2: Short Papers)

2012

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Autonomous Self-Assessment of Autocorrections: Exploring Text Message Dialogues
Tyler Baldwin | Joyce Chai
Proceedings of the 2012 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies

2011

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Beyond Normalization: Pragmatics of Word Form in Text Messages
Tyler Baldwin | Joyce Chai
Proceedings of 5th International Joint Conference on Natural Language Processing

2010

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Hand Gestures in Disambiguating Types of You Expressions in Multiparty Meetings
Tyler Baldwin | Joyce Chai | Katrin Kirchhoff
Proceedings of the SIGDIAL 2010 Conference

2006

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Towards Conversational QA: Automatic Identification of Problematic Situations and User Intent
Joyce Y. Chai | Chen Zhang | Tyler Baldwin
Proceedings of the COLING/ACL 2006 Main Conference Poster Sessions