@inproceedings{qiu-etal-2025-grnformer, title = "{GRNF}ormer: A Biologically-Guided Framework for Integrating Gene Regulatory Networks into {RNA} Foundation Models", author = "Qiu, Mufan and Hu, Xinyu and Zhan, Fengwei and Yun, Sukwon and Peng, Jie and Zhang, Ruichen and Kailkhura, Bhavya and Yang, Jiekun and Chen, Tianlong", editor = "Che, Wanxiang and Nabende, Joyce and Shutova, Ekaterina and Pilehvar, Mohammad Taher", booktitle = "Findings of the Association for Computational Linguistics: ACL 2025", month = jul, year = "2025", address = "Vienna, Austria", publisher = "Association for Computational Linguistics", url = "https://preview.aclanthology.org/ingestion-acl-25/2025.findings-acl.196/", pages = "3805--3819", ISBN = "979-8-89176-256-5" }