Raúl Ortega


2025

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SciClaims: An End-to-End Generative System for Biomedical Claim Analysis
Raúl Ortega | Jose Manuel Gomez-Perez
Proceedings of the 2025 Conference on Empirical Methods in Natural Language Processing: System Demonstrations

We present SciClaims, an interactive web-based system for end-to-end scientific claim analysis in the biomedical domain. Designed for high-stakes use cases such as systematic literature reviews and patent validation, SciClaims extracts claims from text, retrieves relevant evidence from PubMed, and verifies their veracity. The system features a user-friendly interface where users can input scientific text and view extracted claims, predictions, supporting or refuting evidence, and justifications in natural language. Unlike prior approaches, SciClaims seamlessly integrates the entire scientific claim analysis process using a single large language model, without requiring additional fine-tuning. SciClaims is optimized to run efficiently on a single GPU and is publicly available for live interaction.

2020

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ISAAQ - Mastering Textbook Questions with Pre-trained Transformers and Bottom-Up and Top-Down Attention
Jose Manuel Gomez-Perez | Raúl Ortega
Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing (EMNLP)

Textbook Question Answering is a complex task in the intersection of Machine Comprehension and Visual Question Answering that requires reasoning with multimodal information from text and diagrams. For the first time, this paper taps on the potential of transformer language models and bottom-up and top-down attention to tackle the language and visual understanding challenges this task entails. Rather than training a language-visual transformer from scratch we rely on pre-trained transformers, fine-tuning and ensembling. We add bottom-up and top-down attention to identify regions of interest corresponding to diagram constituents and their relationships, improving the selection of relevant visual information for each question and answer options. Our system ISAAQ reports unprecedented success in all TQA question types, with accuracies of 81.36%, 71.11% and 55.12% on true/false, text-only and diagram multiple choice questions. ISAAQ also demonstrates its broad applicability, obtaining state-of-the-art results in other demanding datasets.