Zhifeng Gao
2026
NOSE: Neural Olfactory-Semantic Embedding with Tri-Modal Orthogonal Contrastive Learning
Yanyi Su | Hongshuai Wang | Zhifeng Gao | Jun Cheng
Proceedings of the 64th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)
Yanyi Su | Hongshuai Wang | Zhifeng Gao | Jun Cheng
Proceedings of the 64th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)
Olfaction lies at the intersection of chemical structure, neural encoding, and linguistic perception, yet existing representation methods fail to fully capture this pathway. Current approaches typically model only isolated segments of the olfactory pathway, overlooking the complete chain from molecule to receptors to linguistic descriptions. Such fragmentation yields learned embeddings that lack both biological grounding and semantic interpretability. We propose NOSE (Neural Olfactory-Semantic Embedding), a representation learning framework that aligns three modalities along the olfactory pathway: molecular structure, receptor sequence, and natural language description. Rather than simply fusing these signals, we decouple their contributions via orthogonal constraints, preserving the unique encoded information of each modality. To address the sparsity of olfactory language, we introduce a weak positive sample strategy to calibrate semantic similarity, preventing erroneous repulsion of similar odors in the feature space. Extensive experiments demonstrate that NOSE achieves state-of-the-art (SOTA) performance and excellent zero-shot generalization, confirming the strong alignment between its representation space and human olfactory intuition. Code and data are available at https://github.com/Xianyusyy/NOSE
ProtoCycle: Reflective Tool-Augmented Planning for Text-Guided Protein Design
Yutang Ge | Guojiang Zhao | Sihang Li | Zheng Cheng | Zifeng Zhao | Hanchen Xia | Guolin Ke | Linfeng Zhang | Zhifeng Gao | Yu Guang Wang
Findings of the Association for Computational Linguistics: ACL 2026
Yutang Ge | Guojiang Zhao | Sihang Li | Zheng Cheng | Zifeng Zhao | Hanchen Xia | Guolin Ke | Linfeng Zhang | Zhifeng Gao | Yu Guang Wang
Findings of the Association for Computational Linguistics: ACL 2026
Designing proteins that satisfy natural language functional requirements is a central goal in protein engineering. A straightforward baseline is to fine-tune generic instruction-tuned LLMs as direct text-to-sequence generators, but this is data- and compute-hungry. With limited supervision, LLMs can produce coherent plans in text yet fail to reliably realize them as sequences. This plan–execute gap motivates ProtoCycle, an agentic framework for protein design that uses LLMs primarily to drive a multi-round, feedback-driven decision cycle. ProtoCycle couples an LLM planner with a lightweight tool environment designed to emulate the iterative workflow of human protein engineers and uses LLM-driven reflection on tool feedback to revise plans. Trained with supervised trajectories and online reinforcement learning, ProtoCycle achieves strong language alignment while maintaining competitive foldability, and ablations show that reflection substantially improves sequence quality.
2025
FlightGPT: Towards Generalizable and Interpretable UAV Vision-and-Language Navigation with Vision-Language Models
Hengxing Cai | Jinhan Dong | Jingjun Tan | Jingcheng Deng | Sihang Li | Zhifeng Gao | Haidong Wang | Zicheng Su | Agachai Sumalee | Renxin Zhong
Proceedings of the 2025 Conference on Empirical Methods in Natural Language Processing
Hengxing Cai | Jinhan Dong | Jingjun Tan | Jingcheng Deng | Sihang Li | Zhifeng Gao | Haidong Wang | Zicheng Su | Agachai Sumalee | Renxin Zhong
Proceedings of the 2025 Conference on Empirical Methods in Natural Language Processing
Unmanned Aerial Vehicle (UAV) Vision-and-Language Navigation (VLN) is vital for applications such as disaster response, logistics delivery, and urban inspection. However, existing methods often struggle with insufficient multimodal fusion, weak generalization, and poor interpretability. To address these challenges, we propose FlightGPT, a novel UAV VLN framework built upon Vision-Language Models (VLMs) with powerful multimodal perception capabilities. We design a two-stage training pipeline: first, Supervised Fine-Tuning (SFT) using high-quality demonstrations to improve initialization and structured reasoning; then, Group Relative Policy Optimization (GRPO) algorithm, guided by a composite reward that considers goal accuracy, reasoning quality, and format compliance, to enhance generalization and adaptability. Furthermore, FlightGPT introduces a Chain-of-Thought (CoT)-based reasoning mechanism to improve decision interpretability. Extensive experiments on the city-scale dataset CityNav demonstrate that FlightGPT achieves state-of-the-art performance across all scenarios, with a 9.22% higher success rate than the strongest baseline in unseen environments. Our implementation is publicly available.
SciAssess: Benchmarking LLM Proficiency in Scientific Literature Analysis
Hengxing Cai | Xiaochen Cai | Junhan Chang | Sihang Li | Lin Yao | Wang Changxin | Zhifeng Gao | Hongshuai Wang | Li Yongge | Mujie Lin | Shuwen Yang | Jiankun Wang | Mingjun Xu | Jin Huang | Xi Fang | Jiaxi Zhuang | Yuqi Yin | Yaqi Li | Changhong Chen | Zheng Cheng | Zifeng Zhao | Linfeng Zhang | Guolin Ke
Findings of the Association for Computational Linguistics: NAACL 2025
Hengxing Cai | Xiaochen Cai | Junhan Chang | Sihang Li | Lin Yao | Wang Changxin | Zhifeng Gao | Hongshuai Wang | Li Yongge | Mujie Lin | Shuwen Yang | Jiankun Wang | Mingjun Xu | Jin Huang | Xi Fang | Jiaxi Zhuang | Yuqi Yin | Yaqi Li | Changhong Chen | Zheng Cheng | Zifeng Zhao | Linfeng Zhang | Guolin Ke
Findings of the Association for Computational Linguistics: NAACL 2025
Recent breakthroughs in Large Language Models (LLMs) have revolutionized scientific literature analysis. However, existing benchmarks fail to adequately evaluate the proficiency of LLMs in this domain, particularly in scenarios requiring higher-level abilities beyond mere memorization and the handling of multimodal data.In response to this gap, we introduce SciAssess, a benchmark specifically designed for the comprehensive evaluation of LLMs in scientific literature analysis. It aims to thoroughly assess the efficacy of LLMs by evaluating their capabilities in Memorization (L1), Comprehension (L2), and Analysis & Reasoning (L3). It encompasses a variety of tasks drawn from diverse scientific fields, including biology, chemistry, material, and medicine.To ensure the reliability of SciAssess, rigorous quality control measures have been implemented, ensuring accuracy, anonymization, and compliance with copyright standards. SciAssess evaluates 11 LLMs, highlighting their strengths and areas for improvement. We hope this evaluation supports the ongoing development of LLM applications in scientific literature analysis.SciAssess and its resources are available at https://github.com/sci-assess/SciAssess.
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- Sihang Li 3
- Hengxing Cai 2
- Zheng Cheng 2
- Guolin Ke 2
- Hongshuai Wang 2
- Linfeng Zhang 2
- Zifeng Zhao 2
- Xiaochen Cai 1
- Junhan Chang 1
- Wang Changxin 1
- Changhong Chen 1
- Jun Cheng 1
- Jingcheng Deng (邓竞成) 1
- Jinhan Dong 1
- Xi Fang 1
- Yutang Ge 1
- Jin Huang 1
- Yaqi Li 1
- Mujie Lin 1
- Yanyi Su 1
- Zicheng Su 1
- Agachai Sumalee 1
- Jingjun Tan 1
- Yu Guang Wang 1
- Haidong Wang 1
- Jiankun Wang 1
- Hanchen Xia 1
- Mingjun Xu 1
- Shuwen Yang 1
- Lin Yao 1
- Yuqi Yin 1
- Li Yongge 1
- Guojiang Zhao 1
- Renxin Zhong 1
- Jiaxi Zhuang 1