Guangya Yu


2026

Logical table-to-text generation aims to generate natural language descriptions that fluently and precisely describe the given table with both surface-level and logic-level fidelity. Although large language models (LLMs) have demonstrated strong capabilities in plain text, their proficiency in interpreting and reasoning tabular data is still limited. In this paper, we are the first to comprehensively explore the performance of various LLMs in the logical table-to-text generation task. However, we find that existing LLMs are difficult to achieve satisfactory results in this task. Even worse, existing prompt strategies cannot cope with complex non-chain logical reasoning scenarios on tables. To address the challenges mentioned above, we constructed a new table-related instruction dataset called LogicTableInstruct and instruction-tuned the open-source LLM on this dataset, resulting in the specialized LLM (LogicTableLLaMA-3.1-8B) for table-related tasks. We also introduced a novel reasoning method, Logic Tree-of-Program (LogicToP), to improve the logical reasoning ability of the LLMs on tables. Our extensive experiments on various LLMs demonstrated that LogicToP can effectively improve the performance of LLMs on this task. Our LogicTableLLaMA-3.1-8B model in the 5-shot LogicToP setting achieves state-of-the-art results on the Logic2Text dataset. The code and data will be released at https://github.com/FXLP/LogToP to boost future work on table-related tasks.
Large language models (LLMs) have been widely adopted in healthcare, yet they still encounter significant challenges in complex clinical decision-making scenarios. Existing benchmarks primarily assess LLM performance in single-course settings and lack systematic evaluation in multi-course scenarios, where a patient’s condition evolves over time. To address this gap, we propose ClinicalMC, a benchmark for multi-course clinical decision-making. It includes 1,275 Chinese and 5,804 English samples across four stages from admission to discharge. These stages cover triage, first-course examination/diagnosis/treatment, subsequent multi-course examination/assessment/treatment, and final diagnosis. In ClinicalMC, patients in the English dataset undergo an average of 5.11 clinical courses, whereas those in the Chinese dataset undergo 3.42. To assess LLM performance, we construct a multi-agent evaluation framework that includes patient, examiner, and doctor agents. Based on the benchmark and framework, we design two experimental settings—a single-turn static setting and a multi-turn dynamic setting—and assess three categories of LLMs: 1) closed-source LLMs like GPT-4o-mini; 2) open-source LLMs like DeepSeek-V3, and 3) medical LLMs like HuatuoGPT-o1. Through extensive evaluation, we aim to better understand LLM performance in the medical domain and support its effective deployment in healthcare.
Enhancing the task-specific capabilities of Large Language Models (LLMs) primarily requires substantial instruction-tuning datasets. However, the sheer volume of such data imposes a considerable annotation cost, and a lack of optimization methods for tailoring LLMs to specific tasks persists. To address the above issues, we propose a Planning framework for constructing Extractive-based LLMs called PlanE, which includes data decomposition, instruction tuning, and prompt inference. Additionally, we introduce a Data-Tuning-Inference (DTI) planner, aimed at selecting the optimal base-LLM and its DTI combinations for specific datasets to improve construction efficiency. The experimental results demonstrate the effectiveness of our PlanE from two views: (1) across different datasets using the same base-LLM, and (2) on the same dataset using different base-LLMs. Furthermore, we validate the generalizability of the proposed DTI planner under different optimization objectives. The codes are publicly available at https://github.com/gugugu-469/PlanE.
Biomedical data-to-text generation aims at generating textual natural language descriptions that can fluently and precisely describe the biomedical structured data. However, biomedical data-to-text generation faces the dilemma of a lack of labeled data due to the privacy and scarcity of medical data. Large language models (LLMs) have demonstrated the ability to solve few-shot tasks through in-context learning (ICL). In this paper, we are the first to explore the performance of different LLMs in the biomedical data-to-text generation task.To address the issues of semantic sparsity and misinterpretation of numerical values in biomedical structured data, we propose an EAG (Enrich, Aggregate, and Generate) framework, a simple but efficient LLM-based three-stage biomedical D2T approach in low-resource scenarios. We conduct extensive evaluations of closed-source general LLMs, open-source general LLMs, and open-source medical LLMs. The results show that the EAG framework provides good interpretability and superior performance, achieving state-of-the-art performance on the BioLeaflets dataset. The code and data will be released at https://github.com/FXLP/EAG.
With the remarkable performance of large language models (LLMs) in medicine, particularly their ability to support clinical decision-making in medical dialogues, a key limitation remains: the static reasoning patterns derived from human expert experience are often inadequate for the dynamic and diverse nature of real-world multi-turn conversations. While recent large reasoning models (such as R1) enable deeper and more complex thought processes to address such challenges, they also introduce significant redundancy. Meanwhile, recent studies on reusing atomic thoughts demonstrate a practical pathway toward dynamic and precise reasoning in general domains. In this paper, we investigate the role of atomic thought-based experience in medical dialogue tasks. First, we collect human expert clinical experience. Then, we propose a novel distillation framework that extracts atomic thoughts from teacher models and reuses them to guide reasoning and generate responses. Based on this framework, we construct training data from ReMeDi and fine-tune student models, which demonstrate enhanced performance in both static and interactive medical dialogue scenarios. Furthermore, we examine the impact of experience across various models, datasets, and scenarios. Crucially, transferring this experience empowers weaker models to generate high-quality reasoning data, matching the annotation capabilities of stronger LLMs while significantly reducing costs. The code is available in this repository https://github.com/VioletAmethystLunar/Atomic-Thoughts-Medical-Dialogue.
Training large language models for domain adaptation poses a significant challenge in balancing the acquisition of domain knowledge with the retention of general abilities, often leading to catastrophic forgetting. While curriculum learning offers a promising direction, conventional methods typically rely on a single dimension of knowledge or task, which is insufficient to navigate the trade-off between knowledge breadth and task depth. In this paper, we propose a two-dimensional curriculum learning framework that coordinates model training along two orthogonal axes: the knowledge dimension and the task dimension. We first reconstruct the dataset by clustering instances according to their semantic similarity to general-domain data, and subsequently annotate them with a task hierarchy. Then, we design an integrated curriculum that develops from general to domain-specific knowledge clusters, and within each cluster, from lower- to higher-order cognitive tasks. Compared with the second-best method, our method improves accuracy on medical evaluations by 2.49% and on financial evaluations by 1.2%. Ablation and cross-domain experiments further demonstrate our method as a scalable and effective framework for structured domain adaptation in large language model fine-tuning. We have released the code in an anonymous repository at https://github.com/Melo-1017/Balancing-Knowledge-Breadth-and-Task-Depth.

2025

Medical quality control indicators are essential to assess the qualifications of healthcare institutions for medical services. With the impressive performance of large language models (LLMs) like GPT-4 in the medical field, leveraging these technologies for the Medical Quality Control Indicator Calculation (MQCIC) presents a promising approach. In this work, (1) we introduce a real-world task MQCIC and propose an open-source Chinese electronic medical records (EMRs)-based dataset (CMQCIC-Bench) comprising 785 instances and 76 indicators. (2) We propose a semi-automatic method to enhance the rule representation. Then we propose the Clinical Facts-based Inferential Rule (CF-IR) method that disentangles the clinical fact verification and inferential rule reasoning actions. (3) We conduct comprehensive experiments on 20 representative LLMs, covering general and medical models. Our findings reveal that CF-IR outperforms Chain-of-Thought methods in MQCIC tasks. (4) We conduct an error analysis and investigate the capabilities of clinical fact verification and inferential rule reasoning, providing insights to improve performance in the MQCIC further. The dataset and code is available in this repository https://github.com/YuY-2001/C-MQCIC.
Elasticsearch (ES) is a distributed RESTful search engine optimized for large-scale and long-text search scenarios. Recent research on text-to-Query has explored using large language models (LLMs) to convert user query intent to executable code, making it an increasingly popular research topic. To our knowledge, we are the first to introduce the novel semantic parsing task text-to-ES. To bridge the gap between LLM and ES, in detail, we leverage LLMs and employ domain experts to generate ES query bodies, which are Domain-Specific Language (DSL), along with the corresponding post-processing code to support multi-index ES queries. Consequently, we propose the text-to-ES benchmark that consists of two datasets: Large Elasticsearch Dataset (LED), containing 26,207 text-ES pairs derived from a 224.9GB schema-free database, and ElasticSearch (BirdES)with 10,926 pairs sourced from the Bird dataset on a 33.4GB schema-fixed database. Compared with fourteen advanced LLMs and six code-based LLMs, the model we trained outperformed DeepSeek-R1 by 15.64% on the LED dataset, setting a new state-of-the-art, and achieved 78% of DeepSeek-R1’s performance on the BirdES dataset. Additionally, we provide in-depth experimental analyses and suggest future research directions for this task. Our datasets are available at https://huggingface.co/datasets/Barry1915/Text-to-ES.