Retrieval-augmented generation (RAG) extends the capabilities of large language models (LLMs) by providing access to external knowledge. However, traditional retrieval-augmented LLMs rely on a silent reading paradigm that processes all retrieved documents passively, forcing them to reason without any interaction with the documents. This paradigm contrasts sharply with human interactive reading behavior, where external tools, such as bookmarks and notes, are used to offload cognitive demands. This paper introduces BubbleRAG, an enhanced RAG framework that emulates human interactive reading through annotation and re-reading. Specifically, BubbleRAG utilizes a lightweight thought bubble module that offloads LLM’s internal cognition into external bookmark tokens, which are then annotated back into the context. These bookmarks serve as externalized memory, allowing the LLM to revisit these annotations in subsequent reading and answering. Notably, BubbleRAG is particularly suitable for low-resource scenarios, as the LLM parameters remain frozen. Extensive experiments confirm the effectiveness, robustness, and generalizability of BubbleRAG. Our findings demonstrate that BubbleRAG enables LLMs to achieve superior evidence identification abilities typically seen in retrievers, while establishing a cognitive link between external and internal information during answer generation. The source code is available at https://github.com/yefd/BubbleRAG.

Retrieval augmented generation (RAG) has been applied in many scenarios to augment large language models (LLMs) with external documents provided by retrievers. However, a semantic gap exists between LLMs and retrievers due to differences in their training objectives and architectures. This misalignment forces LLMs to passively accept the documents provided by the retrievers, leading to incomprehension in the generation process, where the LLMs are burdened with the task of distinguishing these documents using their inherent knowledge. This paper proposes R²AG, a novel enhanced RAG framework to fill this gap by incorporating **R**etrieval information into **R**etrieval **A**ugmented **G**eneration. Specifically, R²AG utilizes the nuanced features from the retrievers and employs a R²-Former to capture retrieval information. Then, a retrieval-aware prompting strategy is designed to integrate retrieval information into LLMs’ generation. Notably, R²AG suits low-source scenarios where LLMs and retrievers are frozen. Extensive experiments across five datasets validate the effectiveness, robustness, and efficiency of R²AG. Our analysis reveals that retrieval information serves as an anchor to aid LLMs in the generation process, thereby filling the semantic gap.