Tokenization is the first step in every language model (LM), yet it never takes the sounds of words into account. We investigate how tokenization influences text-only LMs’ ability to represent phonological knowledge. Through a series of probing experiments, we show that subword-based tokenization systematically weakens the encoding of both local (e.g., rhyme) and global (e.g., syllabification) phonological features. To quantify this effect, we introduce the syllabification-tokenization alignment distance (STAD), a metric that measures the misalignment between a model’s tokenization and the natural syllable boundaries of words, and find that higher misalignment correlates with poorer phonological representations, providing a simple diagnostic for phonology-aware tokenization. To address these limitations, we propose a lightweight IPA-based fine-tuning method that infuses phonological awareness into LMs, leading to consistent improvements across three phonology-related tasks while largely preserving math and general reasoning ability, with 1.1% and 0.9% drops on GSM8K and MMLU, respectively.[Our code is available at <https://github.com/liaodisen/Tokenization-Phonology>]