@inproceedings{jansen-etal-2026-codedistiller,
    title = "{C}ode{D}istiller: Automatically Generating Code Libraries for Scientific Coding Agents",
    author = "Jansen, Peter  and
      Hassan, Samiah  and
      Narasimha, Pragnya",
    editor = "Durrett, Greg  and
      Jian, Ping",
    booktitle = "Proceedings of the 64th Annual Meeting of the {A}ssociation for {C}omputational {L}inguistics (Volume 3: System Demonstrations)",
    month = jul,
    year = "2026",
    address = "San Diego, California, United States",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/ingest-acl/2026.acl-demo.10/",
    pages = "99--107",
    ISBN = "979-8-89176-392-0",
    abstract = "Automated Scientific Discovery (ASD) systems can help automatically generate and run code-based experiments, but their capabilities are limited by the code they can reliably generate from parametric knowledge alone. As a result, current systems either mutate a small number of manually-crafted experiment examples, or operate solely from parametric knowledge, limiting quality and reach. We introduce CodeDistiller, a system that automatically distills large collections of scientific Github repositories into a vetted library of working domain-specific code examples, allowing ASD agents to expand their capabilities without manual effort. Using a combination of automatic and domain-expert evaluation on 250 materials science repositories, we find the best model is capable of producing functional examples for 74{\%} of repositories, while our downstream evaluation shows an ASD agent augmented with a CodeDistiller generated library produces more accurate, complete, and scientifically sound experiments than an agent with only general materials-science code examples. We also evaluate LLM-as-a-judge ratings against domain-expert ratings in an A/B testing paradigm, finding moderate agreement and suggesting that inexpensive proxy metrics may be feasible for evaluating scientific discovery systems at scale."
}