PromptRad: Knowledge-Enhanced Multi-Label Prompt-Tuning for Low-Resource Radiology Report Labeling
Ying-Jia Lin, Tzu-Chin Lo, Ping-Chien Li, Chi-Tung Cheng, Chien-Hung Liao, Hung-Yu Kao
Abstract
Automatic report labeling facilitates the identification of clinical findings from unstructured text and enables large-scale annotation for medical imaging research. Existing rule-based labelers struggle with the diverse descriptions in clinical reports, while fine-tuning pre-trained language models (PLMs) requires large amounts of labeled data that are often unavailable in clinical settings. In this paper, we propose PromptRad, a knowledge-enhanced multi-label prompt-tuning approach for radiology report labeling under low-resource settings. PromptRad reformulates multi-label classification as masked language modeling and incorporates synonyms from the UMLS Metathesaurus into a multi-word verbalizer to enrich category representations. By fine-tuning the PLM without additional classification layers, PromptRad requires substantially less labeled data than conventional fine-tuning. Experiments on liver CT (computed tomography) reports show that PromptRad outperforms dictionary-based and fine-tuning baselines with only 32 labeled training examples, and achieves competitive performance with GPT-4 despite using a much smaller model. Further analysis demonstrates that PromptRad captures complex negation patterns more effectively than existing methods, making it a promising solution for report labeling in data-scarce clinical scenarios. Our code is available at https://github.com/ila-lab/PromptRad.- Anthology ID:
- 2026.bionlp-1.20
- Volume:
- BioNLP 2026
- Month:
- July
- Year:
- 2026
- Address:
- San Diego, California
- Editors:
- Dina Demner-Fushman, Sophia Ananiadou, Kirk Roberts, Junichi Tsujii
- Venues:
- BioNLP | WS
- SIG:
- Publisher:
- Association for Computational Linguistics
- Note:
- Pages:
- 235–249
- Language:
- URL:
- https://preview.aclanthology.org/ingest-acl-workshops/2026.bionlp-1.20/
- DOI:
- Cite (ACL):
- Ying-Jia Lin, Tzu-Chin Lo, Ping-Chien Li, Chi-Tung Cheng, Chien-Hung Liao, and Hung-Yu Kao. 2026. PromptRad: Knowledge-Enhanced Multi-Label Prompt-Tuning for Low-Resource Radiology Report Labeling. In BioNLP 2026, pages 235–249, San Diego, California. Association for Computational Linguistics.
- Cite (Informal):
- PromptRad: Knowledge-Enhanced Multi-Label Prompt-Tuning for Low-Resource Radiology Report Labeling (Lin et al., BioNLP 2026)
- PDF:
- https://preview.aclanthology.org/ingest-acl-workshops/2026.bionlp-1.20.pdf