@proceedings{bionlp-2010-19,
    title = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1900/"
}
@inproceedings{vlachos-2010-two,
    title = "Two Strong Baselines for the {B}io{NLP} 2009 Event Extraction Task",
    author = "Vlachos, Andreas",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1901/",
    pages = "1--9"
}
@inproceedings{liu-etal-2010-recognizing,
    title = "Recognizing Biomedical Named Entities Using Skip-Chain Conditional Random Fields",
    author = "Liu, Jingchen  and
      Huang, Minlie  and
      Zhu, Xiaoyan",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1902/",
    pages = "10--18"
}
@inproceedings{ohta-etal-2010-event,
    title = "Event Extraction for Post-Translational Modifications",
    author = "Ohta, Tomoko  and
      Pyysalo, Sampo  and
      Miwa, Makoto  and
      Kim, Jin-Dong  and
      Tsujii, Jun{'}ichi",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1903/",
    pages = "19--27"
}
@inproceedings{bjorne-etal-2010-scaling,
    title = "Scaling up Biomedical Event Extraction to the Entire {P}ub{M}ed",
    author = {Bj{\"o}rne, Jari  and
      Ginter, Filip  and
      Pyysalo, Sampo  and
      Tsujii, Jun{'}ichi  and
      Salakoski, Tapio},
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1904/",
    pages = "28--36"
}
@inproceedings{miwa-etal-2010-comparative,
    title = "A Comparative Study of Syntactic Parsers for Event Extraction",
    author = "Miwa, Makoto  and
      Pyysalo, Sampo  and
      Hara, Tadayoshi  and
      Tsujii, Jun{'}ichi",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1905/",
    pages = "37--45"
}
@inproceedings{kilicoglu-etal-2010-arguments,
    title = "Arguments of Nominals in Semantic Interpretation of Biomedical Text",
    author = "Kilicoglu, Halil  and
      Fiszman, Marcelo  and
      Rosemblat, Graciela  and
      Marimpietri, Sean  and
      Rindflesch, Thomas",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1906/",
    pages = "46--54"
}
@inproceedings{plaza-etal-2010-improving,
    title = "Improving Summarization of Biomedical Documents Using Word Sense Disambiguation",
    author = "Plaza, Laura  and
      Stevenson, Mark  and
      D{\'i}az, Alberto",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1907/",
    pages = "55--63"
}
@inproceedings{jha-elhadad-2010-cancer,
    title = "Cancer Stage Prediction Based on Patient Online Discourse",
    author = "Jha, Mukund  and
      Elhadad, No{\'e}mie",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1908/",
    pages = "64--71"
}
@inproceedings{gerner-etal-2010-exploration,
    title = "An Exploration of Mining Gene Expression Mentions and Their Anatomical Locations from Biomedical Text",
    author = "Gerner, Martin  and
      Nenadic, Goran  and
      Bergman, Casey M.",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1909/",
    pages = "72--80"
}
@inproceedings{apostolova-tomuro-2010-exploring,
    title = "Exploring Surface-Level Heuristics for Negation and Speculation Discovery in Clinical Texts",
    author = "Apostolova, Emilia  and
      Tomuro, Noriko",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1910/",
    pages = "81--82"
}
@inproceedings{chowdhury-lavelli-2010-disease,
    title = "Disease Mention Recognition with Specific Features",
    author = "Chowdhury, Md. Faisal Mahbub  and
      Lavelli, Alberto",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1911/",
    pages = "83--90"
}
@inproceedings{frunza-inkpen-2010-extraction,
    title = "Extraction of Disease-Treatment Semantic Relations from Biomedical Sentences",
    author = "Frunza, Oana  and
      Inkpen, Diana",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1912/",
    pages = "91--98"
}
@inproceedings{guo-etal-2010-identifying,
    title = "Identifying the Information Structure of Scientific Abstracts: An Investigation of Three Different Schemes",
    author = "Guo, Yufan  and
      Korhonen, Anna  and
      Liakata, Maria  and
      Silins, Ilona  and
      Sun, Lin  and
      Stenius, Ulla",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1913/",
    pages = "99--107"
}
@inproceedings{heimonen-etal-2010-reconstruction,
    title = "Reconstruction of Semantic Relationships from Their Projections in Biomolecular Domain",
    author = {Heimonen, Juho  and
      Bj{\"o}rne, Jari  and
      Salakoski, Tapio},
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1914/",
    pages = "108--116"
}
@inproceedings{leaman-etal-2010-towards,
    title = "Towards {I}nternet-Age Pharmacovigilance: Extracting Adverse Drug Reactions from User Posts in Health-Related Social Networks",
    author = "Leaman, Robert  and
      Wojtulewicz, Laura  and
      Sullivan, Ryan  and
      Skariah, Annie  and
      Yang, Jian  and
      Gonzalez, Graciela",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1915/",
    pages = "117--125"
}
@inproceedings{morante-2010-semantic,
    title = "Semantic Role Labeling of Gene Regulation Events: Preliminary Results",
    author = "Morante, Roser",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1916/",
    pages = "126--127"
}
@inproceedings{naderi-witte-2010-ontology,
    title = "Ontology-Based Extraction and Summarization of Protein Mutation Impact Information",
    author = "Naderi, Nona  and
      Witte, Ren{\'e}",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1917/",
    pages = "128--129"
}
@inproceedings{park-choi-2010-extracting,
    title = "Extracting Distinctive Features of Swine ({H}1{N}1) Flu through Data Mining Clinical Documents",
    author = "Park, Heekyong  and
      Choi, Jinwook",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1918/",
    pages = "130--131"
}
@inproceedings{pyysalo-etal-2010-towards,
    title = "Towards Event Extraction from Full Texts on Infectious Diseases",
    author = "Pyysalo, Sampo  and
      Ohta, Tomoko  and
      Cho, Han-Cheol  and
      Sullivan, Dan  and
      Mao, Chunhong  and
      Sobral, Bruno  and
      Tsujii, Jun{'}ichi  and
      Ananiadou, Sophia",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1919/",
    pages = "132--140"
}
@inproceedings{stubbs-harshfield-2010-applying,
    title = "Applying the {TARSQI} Toolkit to Augment Text Mining of {EHR}s",
    author = "Stubbs, Amber  and
      Harshfield, Benjamin",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1920/",
    pages = "141--143"
}
@inproceedings{van-landeghem-etal-2010-integration,
    title = "Integration of Static Relations to Enhance Event Extraction from Text",
    author = "Van Landeghem, Sofie  and
      Pyysalo, Sampo  and
      Ohta, Tomoko  and
      Van de Peer, Yves",
    editor = "Cohen, K. Bretonnel  and
      Demner-Fushman, Dina  and
      Ananiadou, Sophia  and
      Pestian, John  and
      Tsujii, Jun{'}ichi  and
      Webber, Bonnie",
    booktitle = "Proceedings of the 2010 Workshop on Biomedical Natural Language Processing",
    month = jul,
    year = "2010",
    address = "Uppsala, Sweden",
    publisher = "Association for Computational Linguistics",
    url = "https://preview.aclanthology.org/fix-old-resolve/W10-1921/",
    pages = "144--152"
}