This paper describes the inference system of FZI-WIM at the SemEval-2024 Task 2: Safe Biomedical Natural Language Inference for Clinical Trials. Our system utilizes the chain of thought (CoT) paradigm to tackle this complex reasoning problem and further improve the CoT performance with self-consistency. Instead of greedy decoding, we sample multiple reasoning chains with the same prompt and make thefinal verification with majority voting. The self-consistent CoT system achieves a baseline F1 score of 0.80 (1st), faithfulness score of 0.90 (3rd), and consistency score of 0.73 (12th). We release the code and data publicly.

Alzheimer’s Disease (AD) is a neurodegenerative disorder that significantly impacts a patient’s ability to communicate and organize language. Traditional methods for detecting AD, such as physical screening or neurological testing, can be challenging and time-consuming. Recent research has explored the use of deep learning techniques to distinguish AD patients from non-AD patients by analysing the spontaneous speech. These models, however, are limited by the availability of data. To address this, we propose a novel contrastive data augmentation method, which simulates the cognitive impairment of a patient by randomly deleting a proportion of text from the transcript to create negative samples. The corrupted samples are expected to be in worse conditions than the original by a margin. Experimental results on the benchmark ADReSS Challenge dataset demonstrate that our model achieves the best performance among language-based models.

Relation prediction on knowledge graphs (KGs) attempts to infer the missing links between entities. Most previous studies are limited to the transductive setting where all entities must be seen during the training, making them unable to perform reasoning on emerging entities. Recently, the inductive setting is proposed to handle the entities in the test phase to be unseen during training, However, it suffers from the inefficient reasoning under the enclosing subgraph extraction issue and the lack of effective entity-independent feature modeling. To this end, we propose a novel Query Adaptive Anchor Representation (QAAR) model for inductive relation prediction. First, we extract one opening subgraph and perform reasoning by one time for all candidate triples, which is more efficient when the number of candidate triples is large. Second, we define some query adaptive anchors which are independent on any specific entity. Based on these anchors, we take advantage of the transferable entity-independent features (relation-aware, structure-aware and distance features) that can be used to produce entity embeddings for emerging unseen entities. Such entity-independent features is modeled by a query-aware graph attention network on the opening subgraph. Experimental results demonstrate that our proposed QAAR outperforms state-of-the-art baselines in inductive relation prediction task.

The task of repository-level code completion is to continue writing the unfinished code based on a broader context of the repository. While for automated code completion tools, it is difficult to utilize the useful information scattered in different files. We propose RepoCoder, a simple, generic, and effective framework to address the challenge. It streamlines the repository-level code completion process by incorporating a similarity-based retriever and a pre-trained code language model in an iterative retrieval-generation pipeline. RepoCoder makes effective utilization of repository-level information for code completion and has the ability to generate code at various levels of granularity. Moreover, we propose a new benchmark RepoBench, which consists of the latest and high-quality real-world repositories covering line, API invocation, and function body completion scenarios. Experimental results indicate that RepoCoder significantly improves the In-File completion baseline by over 10% in all settings and consistently outperforms the vanilla retrieval-augmented code completion approach. Furthermore, we validate the effectiveness of RepoCoder through comprehensive analysis, providing valuable insights for future research. Our source code and benchmark will be publicly available after the paper review.

Automatic code summarization, which aims to describe the source code in natural language, has become an essential task in software maintenance. Our fellow researchers have attempted to achieve such a purpose through various machine learning-based approaches. One key challenge keeping these approaches from being practical lies in the lacking of retaining the semantic structure of source code, which has unfortunately been overlooked by the state-of-the-art. Existing approaches resort to representing the syntax structure of code by modeling the Abstract Syntax Trees (ASTs). However, the hierarchical structures of ASTs have not been well explored. In this paper, we propose CODESCRIBE to model the hierarchical syntax structure of code by introducing a novel triplet position for code summarization. Specifically, CODESCRIBE leverages the graph neural network and Transformer to preserve the structural and sequential information of code, respectively. In addition, we propose a pointer-generator network that pays attention to both the structure and sequential tokens of code for a better summary generation. Experiments on two real-world datasets in Java and Python demonstrate the effectiveness of our proposed approach when compared with several state-of-the-art baselines.

Automatically generating compilable programs with (or without) natural language descriptions has always been a touchstone problem for computational linguistics and automated software engineering. Existing deep-learning approaches model code generation as text generation, either constrained by grammar structures in decoder, or driven by pre-trained language models on large-scale code corpus (e.g., CodeGPT, PLBART, and CodeT5). However, few of them account for compilability of the generated programs. To improve compilability of the generated programs, this paper proposes COMPCODER, a three-stage pipeline utilizing compiler feedback for compilable code generation, including language model fine-tuning, compilability reinforcement, and compilability discrimination. Comprehensive experiments on two code generation tasks demonstrate the effectiveness of our proposed approach, improving the success rate of compilation from 44.18 to 89.18 in code completion on average and from 70.3 to 96.2 in text-to-code generation, respectively, when comparing with the state-of-the-art CodeGPT.

Recent years have witnessed increasing interest in code representation learning, which aims to represent the semantics of source code into distributed vectors. Currently, various works have been proposed to represent the complex semantics of source code from different views, including plain text, Abstract Syntax Tree (AST), and several kinds of code graphs (e.g., Control/Data Flow Graph). However, most of them only consider a single view of source code independently, ignoring the correspondences among different views. In this paper, we propose to integrate different views with the natural-language description of source code into a unified framework with Multi-View contrastive Pre-training, and name our model as CODE-MVP. Specifically, we first extract multiple code views using compiler tools, and learn the complementary information among them under a contrastive learning framework. Inspired by the type checking in compilation, we also design a fine-grained type inference objective in the pre-training. Experiments on three downstream tasks over five datasets demonstrate the superiority of CODE-MVP when compared with several state-of-the-art baselines. For example, we achieve 2.4/2.3/1.1 gain in terms of MRR/MAP/Accuracy metrics on natural language code retrieval, code similarity, and code defect detection tasks, respectively.

The knowledge graph (KG) stores a large amount of structural knowledge, while it is not easy for direct human understanding. Knowledge graph-to-text (KG-to-text) generation aims to generate easy-to-understand sentences from the KG, and at the same time, maintains semantic consistency between generated sentences and the KG. Existing KG-to-text generation methods phrase this task as a sequence-to-sequence generation task with linearized KG as input and consider the consistency issue of the generated texts and KG through a simple selection between decoded sentence word and KG node word at each time step. However, the linearized KG order is obtained through a heuristic search without data-driven optimization. In this paper, we optimize the knowledge description order prediction under the order supervision extracted from the caption and further enhance the consistency of the generated sentences and KG through syntactic and semantic regularization. We incorporate the Part-of-Speech (POS) syntactic tags to constrain the positions to copy words from the KG and employ a semantic context scoring function to evaluate the semantic fitness for each word in its local context when decoding each word in the generated sentence. Extensive experiments are conducted on two datasets, WebNLG and DART, and achieve state-of-the-art performances. Our code is now public available.

Real human conversation data are complicated, heterogeneous, and noisy, from which building open-domain dialogue systems remains a challenging task. In fact, such dialogue data still contains a wealth of information and knowledge, however, they are not fully explored. In this paper, we show existing open-domain dialogue generation methods that memorize context-response paired data with autoregressive or encode-decode language models underutilize the training data. Different from current approaches, using external knowledge, we explore a retrieval-generation training framework that can take advantage of the heterogeneous and noisy training data by considering them as “evidence”. In particular, we use BERTScore for retrieval, which gives better qualities of the evidence and generation. Experiments over publicly available datasets demonstrate that our method can help models generate better responses, even such training data are usually impressed as low-quality data. Such performance gain is comparable with those improved by enlarging the training set, even better. We also found that the model performance has a positive correlation with the relevance of the retrieved evidence. Moreover, our method performed well on zero-shot experiments, which indicates that our method can be more robust to real-world data.

The goal of Knowledge graph embedding (KGE) is to learn how to represent the low dimensional vectors for entities and relations based on the observed triples. The conventional shallow models are limited to their expressiveness. ConvE (Dettmers et al., 2018) takes advantage of CNN and improves the expressive power with parameter efficient operators by increasing the interactions between head and relation embeddings. However, there is no structural information in the embedding space of ConvE, and the performance is still limited by the number of interactions. The recent KBGAT (Nathani et al., 2019) provides another way to learn embeddings by adaptively utilizing structural information. In this paper, we take the benefits of ConvE and KBGAT together and propose a Relation-aware Inception network with joint local-global structural information for knowledge graph Embedding (ReInceptionE). Specifically, we first explore the Inception network to learn query embedding, which aims to further increase the interactions between head and relation embeddings. Then, we propose to use a relation-aware attention mechanism to enrich the query embedding with the local neighborhood and global entity information. Experimental results on both WN18RR and FB15k-237 datasets demonstrate that ReInceptionE achieves competitive performance compared with state-of-the-art methods.

Cross-lingual entity alignment, which aims to match equivalent entities in KGs with different languages, has attracted considerable focus in recent years. Recently, many graph neural network (GNN) based methods are proposed for entity alignment and obtain promising results. However, existing GNN-based methods consider the two KGs independently and learn embeddings for different KGs separately, which ignore the useful pre-aligned links between two KGs. In this paper, we propose a novel Contextual Alignment Enhanced Cross Graph Attention Network (CAECGAT) for the task of cross-lingual entity alignment, which is able to jointly learn the embeddings in different KGs by propagating cross-KG information through pre-aligned seed alignments. We conduct extensive experiments on three benchmark cross-lingual entity alignment datasets. The experimental results demonstrate that our proposed method obtains remarkable performance gains compared to state-of-the-art methods.