Natalia Manola


2023

pdf
Empowering Knowledge Discovery from Scientific Literature: A novel approach to Research Artifact Analysis
Petros Stavropoulos | Ioannis Lyris | Natalia Manola | Ioanna Grypari | Haris Papageorgiou
Proceedings of the 3rd Workshop for Natural Language Processing Open Source Software (NLP-OSS 2023)

Knowledge extraction from scientific literature is a major issue, crucial to promoting transparency, reproducibility, and innovation in the research community. In this work, we present a novel approach towards the identification, extraction and analysis of dataset and code/software mentions within scientific literature. We introduce a comprehensive dataset, synthetically generated by ChatGPT and meticulously curated, augmented, and expanded with real snippets of scientific text from full-text publications in Computer Science using a human-in-the-loop process. The dataset contains snippets highlighting mentions of the two research artifact (RA) types: dataset and code/software, along with insightful metadata including their Name, Version, License, URL as well as the intended Usage and Provenance. We also fine-tune a simple Large Language Model (LLM) using Low-Rank Adaptation (LoRA) to transform the Research Artifact Analysis (RAA) into an instruction-based Question Answering (QA) task. Ultimately, we report the improvements in performance on the test set of our dataset when compared to other base LLM models. Our method provides a significant step towards facilitating accurate, effective, and efficient extraction of datasets and software from scientific papers, contributing to the challenges of reproducibility and reusability in scientific research.

2020

pdf
Research & Innovation Activities’ Impact Assessment: The Data4Impact System
Ioanna Grypari | Dimitris Pappas | Natalia Manola | Haris Papageorgiou
Proceedings of the 1st Workshop on Language Technologies for Government and Public Administration (LT4Gov)

Cat. 2 Show-case: We present the Data4Impact (D4I) platform, a novel end-to-end system for evidence-based, timely and accurate monitoring and evaluation of research and innovation (R&I) activities. Using the latest technological advances in Human Language Technology (HLT) and our data-driven methodology, we build a novel set of indicators in order to track funded projects and their impact on science, the economy and the society as a whole, during and after the project life-cycle. We develop our methodology by targeting Health-related EC projects from 2007 to 2019 to produce solutions that meet the needs of stakeholders (mainly policy-makers and research funders). Various D4I text analytics workflows process datasets and their metadata, extract valuable insights and estimate intermediate results and metrics, culminating in a set of robust indicators that the users can interact with through our dashboard, the D4I Monitor (available at monitor.data4impact.eu). Therefore, our approach, which can be generalized to different contexts, is multidimensional (technology, tools, indicators, dashboard) and the resulting system can provide an innovative solution for public administrators in their policy-making needs related to RDI funding allocation.