Kush Shrivastava


2023

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“Knowledge is Power”: Constructing Knowledge Graph of Abdominal Organs and Using Them for Automatic Radiology Report Generation
Kaveri Kale | Pushpak Bhattacharyya | Aditya Shetty | Milind Gune | Kush Shrivastava | Rustom Lawyer | Spriha Biswas
Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 5: Industry Track)

In conventional radiology practice, the radiologist dictates the diagnosis to the transcriptionist, who then prepares a preliminary formatted report referring to the notes, after which the radiologist reviews the report, corrects the errors, and signs off. This workflow is prone to delay and error. In this paper, we report our work on automatic radiology report generation from radiologists’ dictation, which is in collaboration with a startup about to become Unicorn. A major contribution of our work is the set of knowledge graphs (KGs) of ten abdominal organs- Liver, Kidney, Gallbladder, Uterus, Urinary bladder, Ovary, Pancreas, Prostate, Biliary Tree, and Bowel. Our method for constructing these KGs relies on extracting entity1-relation-entity2 triplets from a large collection (about 10,000) of free-text radiology reports. The quality and coverage of the KGs are verified by two experienced radiologists (practicing for the last 30 years and 8 years, respectively). The dictation of the radiologist is automatically converted to what is called a pathological description which is the clinical description of the findings of the radiologist during ultrasonography (USG). Our knowledge-enhanced deep learning model improves the reported BLEU-3, ROUGE-L, METEOR, and CIDEr scores of the pathological description generation by 2%, 4%, 2% and 2% respectively. To the best of our knowledge, this is the first attempt at representing the abdominal organs in the form of knowledge graphs and utilising these graphs for the automatic generation of USG reports. A Minimum Viable Product (MVP) has been made available to the beta users, i.e., radiologists of reputed hospitals, for testing and evaluation. Our solution guarantees report generation within 30 seconds of running a scan.

2022

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Knowledge Enhanced Deep Learning Model for Radiology Text Generation
Kaveri Kale | Pushpak Bhattacharya | Aditya Shetty | Milind Gune | Kush Shrivastava | Rustom Lawyer | Spriha Biswas
Proceedings of the 19th International Conference on Natural Language Processing (ICON)

Manual radiology report generation is a time-consuming task. First, radiologists prepare brief notes while carefully examining the imaging report. Then, radiologists or their secretaries create a full-text report that describes the findings by referring to the notes. Automatic radiology report generation is the primary objective of this research. The central part of automatic radiology report generation is generating the finding section (main body of the report) from the radiologists’ notes. In this research, we suggest a knowledge graph (KG) enhanced radiology text generator that can provide additional domain-specific information. Our approach uses a KG-BART model to generate a description of clinical findings (referred to as pathological description) from radiologists’ brief notes. We have constructed a parallel dataset of radiologists’ notes and corresponding pathological descriptions to train the KG-BART model. Our findings demonstrate that, compared to the BART-large and T5-large models, the BLEU-2 score of the pathological descriptions generated by our approach is raised by 4% and 9%, and the ROUGE-L score by 2% and 2%, respectively. Our analysis shows that the KG-BART model for radiology text generation outperforms the T5-large model. Furthermore, we apply our proposed radiology text generator for whole radiology report generation.