Sebis at SemEval-2023 Task 7: A Joint System for Natural Language Inference and Evidence Retrieval from Clinical Trial Reports

Juraj Vladika, Florian Matthes


Abstract
With the increasing number of clinical trial reports generated every day, it is becoming hard to keep up with novel discoveries that inform evidence-based healthcare recommendations. To help automate this process and assist medical experts, NLP solutions are being developed. This motivated the SemEval-2023 Task 7, where the goal was to develop an NLP system for two tasks: evidence retrieval and natural language inference from clinical trial data. In this paper, we describe our two developed systems. The first one is a pipeline system that models the two tasks separately, while the second one is a joint system that learns the two tasks simultaneously with a shared representation and a multi-task learning approach. The final system combines their outputs in an ensemble system. We formalize the models, present their characteristics and challenges, and provide an analysis of achieved results. Our system ranked 3rd out of 40 participants with a final submission.
Anthology ID:
2023.semeval-1.257
Volume:
Proceedings of the 17th International Workshop on Semantic Evaluation (SemEval-2023)
Month:
July
Year:
2023
Address:
Toronto, Canada
Editors:
Atul Kr. Ojha, A. Seza Doğruöz, Giovanni Da San Martino, Harish Tayyar Madabushi, Ritesh Kumar, Elisa Sartori
Venue:
SemEval
SIG:
SIGLEX
Publisher:
Association for Computational Linguistics
Note:
Pages:
1863–1870
Language:
URL:
https://aclanthology.org/2023.semeval-1.257
DOI:
10.18653/v1/2023.semeval-1.257
Bibkey:
Cite (ACL):
Juraj Vladika and Florian Matthes. 2023. Sebis at SemEval-2023 Task 7: A Joint System for Natural Language Inference and Evidence Retrieval from Clinical Trial Reports. In Proceedings of the 17th International Workshop on Semantic Evaluation (SemEval-2023), pages 1863–1870, Toronto, Canada. Association for Computational Linguistics.
Cite (Informal):
Sebis at SemEval-2023 Task 7: A Joint System for Natural Language Inference and Evidence Retrieval from Clinical Trial Reports (Vladika & Matthes, SemEval 2023)
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PDF:
https://preview.aclanthology.org/dois-2013-emnlp/2023.semeval-1.257.pdf
Video:
 https://preview.aclanthology.org/dois-2013-emnlp/2023.semeval-1.257.mp4