Philippe Thomas


2022

pdf
Cross-lingual Approaches for the Detection of Adverse Drug Reactions in German from a Patient’s Perspective
Lisa Raithel | Philippe Thomas | Roland Roller | Oliver Sapina | Sebastian Möller | Pierre Zweigenbaum
Proceedings of the Thirteenth Language Resources and Evaluation Conference

In this work, we present the first corpus for German Adverse Drug Reaction (ADR) detection in patient-generated content. The data consists of 4,169 binary annotated documents from a German patient forum, where users talk about health issues and get advice from medical doctors. As is common in social media data in this domain, the class labels of the corpus are very imbalanced. This and a high topic imbalance make it a very challenging dataset, since often, the same symptom can have several causes and is not always related to a medication intake. We aim to encourage further multi-lingual efforts in the domain of ADR detection and provide preliminary experiments for binary classification using different methods of zero- and few-shot learning based on a multi-lingual model. When fine-tuning XLM-RoBERTa first on English patient forum data and then on the new German data, we achieve an F1-score of 37.52 for the positive class. We make the dataset and models publicly available for the community.

pdf
MobASA: Corpus for Aspect-based Sentiment Analysis and Social Inclusion in the Mobility Domain
Aleksandra Gabryszak | Philippe Thomas
Proceedings of the First Computing Social Responsibility Workshop within the 13th Language Resources and Evaluation Conference

In this paper we show how aspect-based sentiment analysis might help public transport companies to improve their social responsibility for accessible travel. We present MobASA: a novel German-language corpus of tweets annotated with their relevance for public transportation, and with sentiment towards aspects related to barrier-free travel. We identified and labeled topics important for passengers limited in their mobility due to disability, age, or when travelling with young children. The data can be used to identify hurdles and improve travel planning for vulnerable passengers, as well as to monitor a perception of transportation businesses regarding the social inclusion of all passengers. The data is publicly available under: https://github.com/DFKI-NLP/sim3s-corpus

2021

pdf
Findings of the WMT 2021 Biomedical Translation Shared Task: Summaries of Animal Experiments as New Test Set
Lana Yeganova | Dina Wiemann | Mariana Neves | Federica Vezzani | Amy Siu | Inigo Jauregi Unanue | Maite Oronoz | Nancy Mah | Aurélie Névéol | David Martinez | Rachel Bawden | Giorgio Maria Di Nunzio | Roland Roller | Philippe Thomas | Cristian Grozea | Olatz Perez-de-Viñaspre | Maika Vicente Navarro | Antonio Jimeno Yepes
Proceedings of the Sixth Conference on Machine Translation

In the sixth edition of the WMT Biomedical Task, we addressed a total of eight language pairs, namely English/German, English/French, English/Spanish, English/Portuguese, English/Chinese, English/Russian, English/Italian, and English/Basque. Further, our tests were composed of three types of textual test sets. New to this year, we released a test set of summaries of animal experiments, in addition to the test sets of scientific abstracts and terminologies. We received a total of 107 submissions from 15 teams from 6 countries.

2020

pdf
Findings of the WMT 2020 Biomedical Translation Shared Task: Basque, Italian and Russian as New Additional Languages
Rachel Bawden | Giorgio Maria Di Nunzio | Cristian Grozea | Inigo Jauregi Unanue | Antonio Jimeno Yepes | Nancy Mah | David Martinez | Aurélie Névéol | Mariana Neves | Maite Oronoz | Olatz Perez-de-Viñaspre | Massimo Piccardi | Roland Roller | Amy Siu | Philippe Thomas | Federica Vezzani | Maika Vicente Navarro | Dina Wiemann | Lana Yeganova
Proceedings of the Fifth Conference on Machine Translation

Machine translation of scientific abstracts and terminologies has the potential to support health professionals and biomedical researchers in some of their activities. In the fifth edition of the WMT Biomedical Task, we addressed a total of eight language pairs. Five language pairs were previously addressed in past editions of the shared task, namely, English/German, English/French, English/Spanish, English/Portuguese, and English/Chinese. Three additional languages pairs were also introduced this year: English/Russian, English/Italian, and English/Basque. The task addressed the evaluation of both scientific abstracts (all language pairs) and terminologies (English/Basque only). We received submissions from a total of 20 teams. For recurring language pairs, we observed an improvement in the translations in terms of automatic scores and qualitative evaluations, compared to previous years.

2018


Football and Beer - a Social Media Analysis on Twitter in Context of the FIFA Football World Cup 2018
Roland Roller | Philippe Thomas | Sven Schmeier
Proceedings of the 2018 EMNLP Workshop SMM4H: The 3rd Social Media Mining for Health Applications Workshop & Shared Task

In many societies alcohol is a legal and common recreational substance and socially accepted. Alcohol consumption often comes along with social events as it helps people to increase their sociability and to overcome their inhibitions. On the other hand we know that increased alcohol consumption can lead to serious health issues, such as cancer, cardiovascular diseases and diseases of the digestive system, to mention a few. This work examines alcohol consumption during the FIFA Football World Cup 2018, particularly the usage of alcohol related information on Twitter. For this we analyse the tweeting behaviour and show that the tournament strongly increases the interest in beer. Furthermore we show that countries who had to leave the tournament at early stage might have done something good to their fans as the interest in beer decreased again.

pdf
A German Corpus for Fine-Grained Named Entity Recognition and Relation Extraction of Traffic and Industry Events
Martin Schiersch | Veselina Mironova | Maximilian Schmitt | Philippe Thomas | Aleksandra Gabryszak | Leonhard Hennig
Proceedings of the Eleventh International Conference on Language Resources and Evaluation (LREC 2018)

2017

pdf
Streaming Text Analytics for Real-Time Event Recognition
Philippe Thomas | Johannes Kirschnick | Leonhard Hennig | Renlong Ai | Sven Schmeier | Holmer Hemsen | Feiyu Xu | Hans Uszkoreit
Proceedings of the International Conference Recent Advances in Natural Language Processing, RANLP 2017

A huge body of continuously growing written knowledge is available on the web in the form of social media posts, RSS feeds, and news articles. Real-time information extraction from such high velocity, high volume text streams requires scalable, distributed natural language processing pipelines. We introduce such a system for fine-grained event recognition within the big data framework Flink, and demonstrate its capabilities for extracting and geo-locating mobility- and industry-related events from heterogeneous text sources. Performance analyses conducted on several large datasets show that our system achieves high throughput and maintains low latency, which is crucial when events need to be detected and acted upon in real-time. We also present promising experimental results for the event extraction component of our system, which recognizes a novel set of event types. The demo system is available at http://dfki.de/sd4m-sta-demo/.

pdf
Common Round: Application of Language Technologies to Large-Scale Web Debates
Hans Uszkoreit | Aleksandra Gabryszak | Leonhard Hennig | Jörg Steffen | Renlong Ai | Stephan Busemann | Jon Dehdari | Josef van Genabith | Georg Heigold | Nils Rethmeier | Raphael Rubino | Sven Schmeier | Philippe Thomas | He Wang | Feiyu Xu
Proceedings of the Software Demonstrations of the 15th Conference of the European Chapter of the Association for Computational Linguistics

Web debates play an important role in enabling broad participation of constituencies in social, political and economic decision-taking. However, it is challenging to organize, structure, and navigate a vast number of diverse argumentations and comments collected from many participants over a long time period. In this paper we demonstrate Common Round, a next generation platform for large-scale web debates, which provides functions for eliciting the semantic content and structures from the contributions of participants. In particular, Common Round applies language technologies for the extraction of semantic essence from textual input, aggregation of the formulated opinions and arguments. The platform also provides a cross-lingual access to debates using machine translation.

pdf
Findings of the WMT 2017 Biomedical Translation Shared Task
Antonio Jimeno Yepes | Aurélie Névéol | Mariana Neves | Karin Verspoor | Ondřej Bojar | Arthur Boyer | Cristian Grozea | Barry Haddow | Madeleine Kittner | Yvonne Lichtblau | Pavel Pecina | Roland Roller | Rudolf Rosa | Amy Siu | Philippe Thomas | Saskia Trescher
Proceedings of the Second Conference on Machine Translation

2016

pdf
Real-Time Discovery and Geospatial Visualization of Mobility and Industry Events from Large-Scale, Heterogeneous Data Streams
Leonhard Hennig | Philippe Thomas | Renlong Ai | Johannes Kirschnick | He Wang | Jakob Pannier | Nora Zimmermann | Sven Schmeier | Feiyu Xu | Jan Ostwald | Hans Uszkoreit
Proceedings of ACL-2016 System Demonstrations

2013

pdf
WBI-DDI: Drug-Drug Interaction Extraction using Majority Voting
Philippe Thomas | Mariana Neves | Tim Rocktäschel | Ulf Leser
Second Joint Conference on Lexical and Computational Semantics (*SEM), Volume 2: Proceedings of the Seventh International Workshop on Semantic Evaluation (SemEval 2013)

2012

pdf
Improving Distantly Supervised Extraction of Drug-Drug and Protein-Protein Interactions
Tamara Bobić | Roman Klinger | Philippe Thomas | Martin Hofmann-Apitius
Proceedings of the Joint Workshop on Unsupervised and Semi-Supervised Learning in NLP

2011

pdf
Not all links are equal: Exploiting Dependency Types for the Extraction of Protein-Protein Interactions from Text
Philippe Thomas | Stefan Pietschmann | Illés Solt | Domonkos Tikk | Ulf Leser
Proceedings of BioNLP 2011 Workshop

pdf
Learning Protein–Protein Interaction Extraction using Distant Supervision
Philippe Thomas | Illés Solt | Roman Klinger | Ulf Leser
Proceedings of Workshop on Robust Unsupervised and Semisupervised Methods in Natural Language Processing