Aditya Shetty


2023

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KGVL-BART: Knowledge Graph Augmented Visual Language BART for Radiology Report Generation
Kaveri Kale | Pushpak Bhattacharyya | Milind Gune | Aditya Shetty | Rustom Lawyer
Proceedings of the 17th Conference of the European Chapter of the Association for Computational Linguistics

Timely generation of radiology reports and diagnoses is a challenge worldwide due to the enormous number of cases and shortage of radiology specialists. In this paper, we propose a Knowledge Graph Augmented Vision Language BART (KGVL-BART) model that takes as input two chest X-ray images- one frontal and the other lateral- along with tags which are diagnostic keywords, and outputs a report with the patient-specific findings. Our system development effort is divided into 3 stages: i) construction of the Chest X-ray KG (referred to as chestX-KG), ii) image feature extraction, and iii) training a KGVL-BART model using the visual, text, and KG data. The dataset we use is the well-known Indiana University Chest X-ray reports with the train, validation, and test split of 3025 instances, 300 instances, and 500 instances respectively. We construct a Chest X-Ray knowledge graph from these reports by extracting entity1-relation-entity2 triples; the triples get extracted by a rule-based tool of our own. Constructed KG is verified by two experienced radiologists (with experience of 30 years and 8 years, respectively). We demonstrate that our model- KGVL-BART- outperforms State-of-the-Art transformer-based models on standard NLG scoring metrics. We also include a qualitative evaluation of our system by experienced radiologist (with experience of 30 years) on the test data, which showed that 73% of the reports generated were fully correct, only 5.5% are completely wrong and 21.5% have important missing details though overall correct. To the best of our knowledge, ours is the first system to make use of multi-modality and domain knowledge to generate X-ray reports automatically.

2022

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Knowledge Enhanced Deep Learning Model for Radiology Text Generation
Kaveri Kale Kale | Pushpak Bhattacharya | Aditya Shetty | Milind Gune | Kush Shrivastava | Rustom Lawyer | Spriha Biswas
Proceedings of the 19th International Conference on Natural Language Processing (ICON)

Manual radiology report generation is a time-consuming task. First, radiologists prepare brief notes while carefully examining the imaging report. Then, radiologists or their secretaries create a full-text report that describes the findings by referring to the notes. Automatic radiology report generation is the primary objective of this research. The central part of automatic radiology report generation is generating the finding section (main body of the report) from the radiologists’ notes. In this research, we suggest a knowledge graph (KG) enhanced radiology text generator that can provide additional domain-specific information. Our approach uses a KG-BART model to generate a description of clinical findings (referred to as pathological description) from radiologists’ brief notes. We have constructed a parallel dataset of radiologists’ notes and corresponding pathological descriptions to train the KG-BART model. Our findings demonstrate that, compared to the BART-large and T5-large models, the BLEU-2 score of the pathological descriptions generated by our approach is raised by 4% and 9%, and the ROUGE-L score by 2% and 2%, respectively. Our analysis shows that the KG-BART model for radiology text generation outperforms the T5-large model. Furthermore, we apply our proposed radiology text generator for whole radiology report generation.