TLPIQ at BioLaySumm: Hide and Seq, a FLAN-T5 Model for Biomedical Summarization
Melody Bechler, Carly Crowther, Emily Luedke, Natasha Schimka, Ibrahim Sharaf
Abstract
BioLaySumm 2025 is a shared task that aims to automatically generate lay summaries of scientific papers for a wider audience of readers without domain-specific knowledge, making scientific discoveries in the domain of biology and medicine more accessible to the general public. Our submission to the task is a FLAN-T5 base model fine-tuned on the abstract and conclusion of articles and expert-written lay summaries from the shared task’s provided datasets. We find that our system performs competitively in terms of relevance, exceeds the baseline on factuality, but falls short on readability.- Anthology ID:
- 2025.bionlp-share.25
- Volume:
- BioNLP 2025 Shared Tasks
- Month:
- August
- Year:
- 2025
- Address:
- Vienna, Austria
- Editors:
- Sarvesh Soni, Dina Demner-Fushman
- Venues:
- BioNLP | WS
- SIG:
- Publisher:
- Association for Computational Linguistics
- Note:
- Pages:
- 196–201
- Language:
- URL:
- https://preview.aclanthology.org/acl25-workshop-ingestion/2025.bionlp-share.25/
- DOI:
- Cite (ACL):
- Melody Bechler, Carly Crowther, Emily Luedke, Natasha Schimka, and Ibrahim Sharaf. 2025. TLPIQ at BioLaySumm: Hide and Seq, a FLAN-T5 Model for Biomedical Summarization. In BioNLP 2025 Shared Tasks, pages 196–201, Vienna, Austria. Association for Computational Linguistics.
- Cite (Informal):
- TLPIQ at BioLaySumm: Hide and Seq, a FLAN-T5 Model for Biomedical Summarization (Bechler et al., BioNLP 2025)
- PDF:
- https://preview.aclanthology.org/acl25-workshop-ingestion/2025.bionlp-share.25.pdf